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33 profile(s) found

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ID Name Species Class Family Logo
MA1632.1 ATF2 Homo sapiens
 Basic leucine zipper factors (bZIP) Jun-related
MA1632.2 ATF2 Homo sapiens
 Basic leucine zipper factors (bZIP) Jun-related
MA1634.1 BATF Homo sapiens
 Basic leucine zipper factors (bZIP) B-ATF-related factors
MA1634.2 BATF Homo sapiens
 Basic leucine zipper factors (bZIP) B-ATF-related factors
MA1988.1 Atf3 Mus musculus
 Basic leucine zipper factors (bZIP) Fos-related
MA1988.2 Atf3 Mus musculus
 Basic leucine zipper factors (bZIP) Fos-related
MA2127.1 atf-2 Caenorhabditis elegans
 Basic leucine zipper factors (bZIP) CEBP-related
MA2157.1 atfs-1 Caenorhabditis elegans
 Basic leucine zipper factors (bZIP) ATF-4-related
MA2192.1 Atf-2 Drosophila melanogaster
 Basic leucine zipper factors (bZIP) Jun-related
MA2193.1 Atf3 Drosophila melanogaster
 Basic leucine zipper factors (bZIP) Fos-related
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.