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236 profile(s) found

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ID Name Species Class Family Logo
MA1043.1 NAC083 Arabidopsis thaliana
 GCM domain factors NAC
MA1043.2 NAC083 Arabidopsis thaliana
 GCM domain factors NAC
MA1044.1 NAC92 Arabidopsis thaliana
 GCM domain factors NAC
MA1044.2 NAC92 Arabidopsis thaliana
 GCM domain factors NAC
MA1045.1 NAC043 Arabidopsis thaliana
 GCM domain factors NAC
MA1045.2 NAC043 Arabidopsis thaliana
 GCM domain factors NAC
MA1046.1 NTL9 Arabidopsis thaliana
 GCM domain factors NAC
MA1075.1 WRKY12 Arabidopsis thaliana
 GCM domain factors WRKY
MA1076.1 WRKY15 Arabidopsis thaliana
 GCM domain factors WRKY
MA1076.2 WRKY15 Arabidopsis thaliana
 GCM domain factors WRKY
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.