Search profile(s)

  1. Home
  2. Search

44 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA1516.2 KLF3 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1517.1 KLF6 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1517.2 KLF6 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1890.1 Klf15 Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1891.1 Klf3/8/12 Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1891.2 Klf3/8/12 Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1892.1 Klf5-like Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1892.2 Klf5-like Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1893.1 Klf6-7-like Ciona intestinalis
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1959.1 KLF7 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
Showing 10 profiles of page 4 from 5 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.