Search profile(s)

  1. Home
  2. Search

2470 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA0570.2 ABF1 Arabidopsis thaliana
 Basic leucine zipper factors (bZIP) Group A
MA0570.3 ABF1 Arabidopsis thaliana
 Basic leucine zipper factors (bZIP) Group A
MA0571.1 ANT Arabidopsis thaliana
 AP2/EREBP AP2
MA0571.2 ANT Arabidopsis thaliana
 AP2/EREBP AP2
MA0573.1 ATHB-9 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA0573.2 ATHB-9 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA0574.1 MYB15 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA0575.1 MYB77 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA0575.2 MYB77 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA0576.1 RAX3 Arabidopsis thaliana
 Tryptophan cluster factors MYB
Showing 10 profiles of page 65 from 247 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.