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236 profile(s) found

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ID Name Species Class Family Logo
MA1091.1 WRKY62 Arabidopsis thaliana
 GCM domain factors WRKY
MA1092.1 WRKY63 Arabidopsis thaliana
 GCM domain factors WRKY
MA1092.2 WRKY63 Arabidopsis thaliana
 GCM domain factors WRKY
MA1093.1 WRKY75 Arabidopsis thaliana
 GCM domain factors WRKY
MA1093.2 WRKY75 Arabidopsis thaliana
 GCM domain factors WRKY
MA1094.1 WRKY8 Arabidopsis thaliana
 GCM domain factors WRKY
MA1094.2 WRKY8 Arabidopsis thaliana
 GCM domain factors WRKY
MA1094.3 WRKY8 Arabidopsis thaliana
 GCM domain factors WRKY
MA1197.1 CAMTA1 Arabidopsis thaliana
 GCM domain factors CAMTA
MA1197.2 CAMTA1 Arabidopsis thaliana
 GCM domain factors CAMTA
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.