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2470 profile(s) found

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ID Name Species Class Family Logo
MA0735.2 GLIS1 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0736.1 GLIS2 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0737.1 GLIS3 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0752.1 ZNF410 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0752.2 ZNF410 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0756.1 ONECUT2 Homo sapiens
 Homeo domain factors HD-CUT
MA0756.2 ONECUT2 Homo sapiens
 Homeo domain factors HD-CUT
MA0756.3 ONECUT2 Homo sapiens
 Homeo domain factors HD-CUT
MA0761.1 ETV1 Homo sapiens
 Tryptophan cluster factors Ets-related
MA0761.2 ETV1 Homo sapiens
 Tryptophan cluster factors Ets-related
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.