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ID Name Species Class Family Logo
MA0974.1 CDF3 Arabidopsis thaliana
 Other C4 zinc finger-type factors DOF
MA0974.2 CDF3 Arabidopsis thaliana
 Other C4 zinc finger-type factors DOF
MA0974.3 CDF3 Arabidopsis thaliana
 Other C4 zinc finger-type factors DOF
MA0975.1 CRF2 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA0976.1 CRF4 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA0976.2 CRF4 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA0976.3 CRF4 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA0977.1 DOF2.5 Arabidopsis thaliana
 Other C4 zinc finger-type factors DOF
MA0978.1 DREB1E Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA0980.1 RAP2-10 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.