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183 profile(s) found

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ID Name Species Class Family Logo
MA0883.2 Dmbx1 Mus musculus
 Homeo domain factors Paired-related HD factors
MA0884.1 DUXA Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0884.2 DUXA Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0891.1 GSC2 Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0891.2 GSC2 Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0894.1 HESX1 Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0894.2 HESX1 Homo sapiens
 Homeo domain factors Paired-related HD factors
MA0919.1 dsc-1 Caenorhabditis briggsae
 Homeo domain factors Paired-related HD factors
MA0919.2 dsc-1 Caenorhabditis briggsae
 Homeo domain factors Paired-related HD factors
MA1382.1 FAR1 Arabidopsis thaliana
 GCM domain factors FRS/FRF
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.