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2470 profile(s) found

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ID Name Species Class Family Logo
MA0587.1 TCP16 Arabidopsis thaliana
 TCP
MA0587.2 TCP16 Arabidopsis thaliana
 TCP
MA0588.1 TGA1 Arabidopsis thaliana
 Basic leucine zipper factors (bZIP) Group D
MA0588.2 TGA1 Arabidopsis thaliana
 Basic leucine zipper factors (bZIP) Group D
MA0589.1 WRKY1 Arabidopsis thaliana
 GCM domain factors WRKY
MA0589.2 WRKY1 Arabidopsis thaliana
 GCM domain factors WRKY
MA0590.1 LFY Arabidopsis thaliana
 LEAFY
MA0591.1 Bach1::Mafk Mus musculus
 Basic leucine zipper factors (bZIP) Jun-related::Maf-related
MA0591.2 Bach1::Mafk Mus musculus
 Basic leucine zipper factors (bZIP) Jun-related::Maf-related
MA0592.1 ESRRA Homo sapiens
 Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.