Search profile(s)

  1. Home
  2. Search

2470 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA1009.1 ARF3 Arabidopsis thaliana
 B3 ARF
MA1012.1 AGL27 Arabidopsis thaliana
 MADS box factors Type II
MA1013.1 GATA10 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1014.1 GATA11 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1015.1 GATA12 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1015.2 GATA12 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1016.1 GATA15 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1016.2 GATA15 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1017.1 GATA8 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
MA1017.2 GATA8 Arabidopsis thaliana
 Other C4 zinc finger-type factors C4-GATA-related
Showing 10 profiles of page 99 from 247 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.